Projects

Research and professional experience

Research Professional

Université Laval · 2024 – present

Quebec, Canada

NeoLab

  • Code management and documentation
  • Technical and methodological support for PhD students
  • Improvement of an Access database
  • Development of a pipeline to prepare, validate, and export LOKI data to EcoTaxa
  • Migration and optimization of educational tools (e.g., R MOOC)
  • Arctic zooplankton taxonomy work

Aquatic Geochemistry Group

  • Development of numerical models for Arctic aquatic ecology
  • Creation of bathymetric maps
  • Writing tutorials on bathymetric data usage
SAMBA-MarAbyss metabarcoding workflow

Bioinformatics Engineer

MARBEC · 2023 – 2024

Sète, France

  • Community ecology analysis on metagenomic datasets using R
  • Work on DATARMOR cluster (GENREC and IMPEC projects)
  • Design of a metabarcoding analysis workflow (SAMBA-MarAbyss)
  • Collaboration with Ifremer (Brest)

Biological Sciences Analyst

IFREMER · 2021

Sète, France

  • Work on environmental DNA (eDNA) datasets
  • Analysis of biodiversity across marine ecosystems (abyssal plains, canyons, seamounts)
  • Development of R scripts for ecological data analysis
  • Focus on intra-specific diversity
  • Creation of RMarkdown workflow to identify OTUs and visualize ASV networks